The short answer: Start with a careful assessment, remove no more than 20–30% of live canopy in year one, and follow a staged pruning and care schedule over three growing seasons to restore structure and fruiting without shocking the tree.
Assess and Plan
Begin in late winter while the tree is fully dormant—typically January or February in temperate climates—before buds swell. Walk the tree with a tape measure and note trunk diameter at 12 inches above the root crown; record that diameter in inches and photo-document the canopy from each compass point. Use a 25 mm (1-inch) paint stick or chalk line to mark the trunk height that is 12 inches above the root crown so you measure consistently. Count primary scaffold branches and estimate canopy spread in feet; for a medium plum, a 12–16 foot spread is common.
Inspect the trunk and root crown for graft unions and buried collars: find the graft union or root flare and clear soil or mulch so the crown is visible for at least 2 to 3 inches. Note any cracks, cankers, or soft wood; tap suspicious areas with a screwdriver and check for hollow sounds over a 4–6 inch length. Photograph and list hazardous branches by diameter: note any branch over 2 inches that will require a saw and an assistant or ladder for safe removal.
Make a staged removal plan with specific percentages and timing: year one remove 20%–30% live canopy focused on deadwood and crossing limbs; year two remove 15%–25% focused on secondary branches; year three make the final 10%–20% corrections and train new scaffolds. Lay out disposal logistics now: reserve a chipper to reduce cut material to 1–3 inch chips, or arrange three municipal green-waste pickups over 6 months. For large trees plan 2 to 4 sessions of 2 to 6 hours each rather than a single marathon day.
Percent cuts, sessions, and chip sizes over 3 years.
Start Jan to Feb dormant
Measure trunks 12 inches up and photo every compass point before buds swell in late winter.
Saw over 2 inches
Pruners under 1 inch, loppers to 1.5, saw past 2 inches with three cuts on heavy limbs.
“Prune to open the center and restore scaffold spacing; safety and measured removals beat wholesale cutting.”
—

Prune: Year One Focus
Year one is about safety, lightening the canopy, and selecting scaffold branches. Start by removing deadwood and any branches that cross or rub, prioritizing cuts by diameter: remove all deadwood under 1 inch with pruners, 1 to 1.5 inches with loppers, and 2 inches or greater with a saw. When estimating the 20%–30% target, calculate by eye using thirds of the canopy mass—remove one or two thirds of an overly dense sector, not random branches across the tree.
Use the three-cut method for limbs over 2 inches: make an undercut 6 to 12 inches from the trunk about one-third through the branch, then a top cut a few inches further out to drop the weight, then a final cut just outside the branch collar. Preserve the collar by cutting no closer than 1/4 inch to it; if the collar is not obvious, leave a small stub and reassess next season. Do not paint wounds; trees compartmentalize better when left to dry—expect a 2 to 6 month callusing period on 2–3 inch cuts in spring conditions.
When selecting new scaffolds aim for 4 to 8 well-spaced primary limbs with crotch angles of 45 to 60 degrees from the trunk and vertical spacing of 6 to 12 inches along the trunk depending on tree height. If a desirable scaffold is a thin branch (1/2 to 1 inch), retain it and shorten by 25% to encourage outward growth over the next 12 months. Tie new scaffold leaders with 1/2 inch horticultural twine and adjustable soft ties; check ties every 3 months and loosen after 6 months to avoid girdling.
After pruning, protect root health: water the root zone with approximately 10 gallons per inch of trunk diameter per week during the growing season for the first two years following cuts, or provide 1 inch of water per week measured with a rain gauge—whichever you can apply evenly. Mulch a 3-foot radius with 2 to 3 inches of organic mulch, keeping mulch 6 inches from the trunk to avoid collar rot. Fertilize modestly in early spring: apply a balanced 10-10-10 granular fertilizer at a rate of roughly 1 pound per inch of trunk diameter once each spring for the first two years, or follow a soil test taken from 0 to 6 inches deep across four spots under the canopy.
Monitor for vigorous sucker and water-sprout growth and remove them promptly: cut suckers at the base when they are 1–2 inches in diameter, and prune out water sprouts while small (under 1/2 inch) to conserve energy. Expect a flush of regrowth in the first 6 to 12 months; plan 2 to 4 short maintenance sessions each growing season to remove unwanted shoots and check stake and tie integrity.
Year two continues restructuring: remove another 15%–25% of the canopy, focusing on secondary branches that undermine the new scaffold pattern and correcting narrow crotch angles. In year three, finalize the shape, filling gaps and correcting angles; by month 36 you should see a steady return of fruiting if root health is good and watering and fertilizing were consistent.

Frequently Asked Questions
Further reading: How to Water First-Year Fruit Trees: A Schedule That Works · How to Plant Bare-Root Apple Trees in a Small Backyard
Sources: UMN Extension
